DDsC dispersion correction: Difference between revisions

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The expression for dispersion energy within thedDsC dispersion correction~\cite{Steinmann:11a,Steinmann:11b} (DFT-dDsC) is
The expression for dispersion energy within thedDsC dispersion correction<ref name="steinmann2011"/><ref name="steinmann2011b"/> (DFT-dDsC) is very similar to that of the {{TAG|DFT-D2}} method (see the equation for <math>E_{disp}</math> for the {TAG|DFT-D2}} method). The important difference is, however, that the dispersion coefficients and damping function are charge-density dependent. The dDsC method is therefore able to take into account variations in the vdW contributions of atoms due to their local chemical environment. In this method, polarizability, dispersion coefficients, charge and charge-overlap of an atom in a molecule or solid are computed in the basis of a simplified exchange-hole dipole moment formalism<ref name="steinmann2011"/> pioneered by Becke and Johnson<ref name="becke2007"/>.
very similar to that of DFT-D2 method (see eq.~\ref{eq:VDWenergy}),
the important difference is, however, that the dispersion coefficients
and damping function are charge-density dependent. The dDsC method
is therefore able to take into account variations in vdW contributions
of atoms due to their local chemical environment.
In this method, polarizability, dispersion coeficients, charge
and charge-overlap of an atom in molecule or solid are computed
in the basis of a simplified exchange-hole dipole
moment formalism,\cite{Steinmann:11a} pioneered by Becke and Johnson\cite{Becke:05}.


The dDsC dispersion energy is expressed as follows
The dDsC dispersion energy is expressed as follows
\begin{equation}
 
%{{E}_{\mathrm{disp}}}=-\sum\limits_{i=2}^{{{N}_\mathrm{at}}}{\sum\limits_{j=1}^{i-1}\sum\limits_{n=3}^{n=5}{{{f}_{2n}}(b{{R}_{ij}})\frac{C_{2n}^{ij}}{R_{ij}^{2n}}}}
<math>{{E}_{\mathrm{disp}}}=-\sum\limits_{i=2}^{{{N}_\mathrm{at}}}{\sum\limits_{j=1}^{i-1}\sum\limits_{n=3}^{n=5}{{{f}_{2n}}(b{{R}_{ij}})\frac{C_{2n}^{ij}}{R_{ij}^{2n}}}}
{{E}_{\mathrm{disp}}}=-\sum\limits_{i=2}^{{{N}_{\mathrm{at}}}}{\sum\limits_{j=1}^{i-1}
{{E}_{\mathrm{disp}}}=-\sum\limits_{i=2}^{{{N}_{\mathrm{at}}}}{\sum\limits_{j=1}^{i-1}
{{{f}_{6}}(b{{R}_{ij}})\frac{C_{6,ij}}{R_{ij}^{6}}}}
{{{f}_{6}}(b{{R}_{ij}})\frac{C_{6,ij}}{R_{ij}^{6}}}} </math>
\label{eqn:dDsC}
 
\end{equation}
where <math>N_{\mathrm{at}}</math> is the number of atoms in the system and <math>b</math> is the Tang and Toennies (TT) damping factor. The damping function <math>f_{6}(bR_{ij})</math> is defined as follows
where $N_{\mathrm{at}}$ is the number of atoms in the system and $b$ is the
 
Tang and Toennies (TT) damping factor.
<math>f_{6}(x)=1-\exp(-x)\sum^{6}_{k=0}\frac{x^k}{k!}</math>
The damping function $f_{6}(bR_{ij})$ is defined as follows
 
\begin{equation}
and its role is to attenuate the correction at short internuclear distances. A key component of the dDsC method is the damping factor <math>b</math>:
f_{6}(x)=1-\exp(-x)\sum^{6}_{k=0}\frac{x^k}{k!}
 
\end{equation}
<math>b(x)=\frac{2 b_{ij,\mathrm{asym}}}{{{e}^{{{a}_{0}}\cdot x}}+1} </math>
and its role is to attenuate the correction at short internuclear
 
distances.
where the fitted parameter <math>a_{0}</math> controls the short-range behaviour and <math>x</math> is the damping argument for the TT-damping factor associated with two separated atoms (<math>b_{ij,\mathrm{asym}}</math>).
A key component of the dDsC method is the damping factor $b$:
The term <math>b_{ij,\mathrm{asym}}</math> is computed according to the combination rule:
\begin{equation}
 
%b(x)=F(x)b_{ij,\mathrm{asym}},
<math>b_{ij,\mathrm{asym}}=2\frac{b_{ii,\mathrm{asym}}\cdot b_{jj,\mathrm{asym}}}{b_{ii,\mathrm{asym}} + b_{jj,\mathrm{asym}}} </math>
b(x)=\frac{2 b_{ij,\mathrm{asym}}}{{{e}^{{{a}_{0}}\cdot x}}+1} ,
 
\end{equation}
with <math>b_{ii,\mathrm{asym}}</math> being estimated from  effective atomic polarizabilities:
where the fitted parameter $a_0$ controls the short-range behavior
 
and
<math>{b}_{ii,\mathrm{asym}}={b}_{0}\cdot \sqrt[3]{\frac{1}{\alpha_{i}}}</math>
$x$ is the damping argument for
 
the TT-damping factor associated with two separated atoms ($b_{ij,\mathrm{asym}}$).
The term
$b_{ij,\mathrm{asym}}$ is computed according to the combination rule:
\begin{equation}
b_{ij,\mathrm{asym}}=2\frac{b_{ii,\mathrm{asym}}\cdot b_{jj,\mathrm{asym}}}{b_{ii,\mathrm{asym}} + b_{jj,\mathrm{asym}}}
\end{equation}
with $b_{ii,\mathrm{asym}}$ being estimated from  effective atomic polarizabilities:
\begin{equation}
{{b}_{ii,\mathrm{asym}}}={{b}_{0}}\cdot \sqrt[3]{\frac{1}{{{\alpha }_{i}}}}
\end{equation}
The effective atom-in-molecule polarizabilities ${\alpha }_{i}$ are
The effective atom-in-molecule polarizabilities ${\alpha }_{i}$ are
computed from the tabulated free-atomic polarizabilities (available for the
computed from the tabulated free-atomic polarizabilities (available for the
Line 101: Line 82:
investigated and validated.\cite{Bremond:14}
investigated and validated.\cite{Bremond:14}
\end{itemize}
\end{itemize}
== Related Tags and Sections ==
{{TAG|IVDW}},
{{TAG|IALGO}},
{{TAG|DFT-D2}},
{{TAG|DFT-D3}},
{{TAG|Tkatchenko-Scheffler method}}
== References ==
<references>
<ref name="steinmann2011">[http://aip.scitation.org/doi/full/10.1063/1.3545985 S. N. Steinmann, and C. Corminboeuf, J. Chem. Phys. 134, 044117 (2011).]</ref>
<ref name="steinmann2011b">[http://pubs.acs.org/doi/abs/10.1021/ct200602x S. N. Steinmann, and C. Corminboeuf, J. Chem. Theory Comput. 7, 3567 (2011).]</ref>
<ref name="becke2007">http://aip.scitation.org/doi/full/10.1063/1.2795701 A. D. Becke, and E. R. Johnson, ``Exchange-hole dipole moment and the dispersion interaction'', J. Chem. Phys. 122, 154104 (2005). ]</ref>
<ref name="kerber">[http://onlinelibrary.wiley.com/doi/10.1002/jcc.21069/abstract Kerber and J. Sauer, J. Comp. Chem. 29, 2088 (2008).]</ref>
</references>
----
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[[Category:INCAR]]

Revision as of 14:52, 20 January 2017

The expression for dispersion energy within thedDsC dispersion correction[1][2] (DFT-dDsC) is very similar to that of the DFT-D2 method (see the equation for for the {TAG|DFT-D2}} method). The important difference is, however, that the dispersion coefficients and damping function are charge-density dependent. The dDsC method is therefore able to take into account variations in the vdW contributions of atoms due to their local chemical environment. In this method, polarizability, dispersion coefficients, charge and charge-overlap of an atom in a molecule or solid are computed in the basis of a simplified exchange-hole dipole moment formalism[1] pioneered by Becke and Johnson[3].

The dDsC dispersion energy is expressed as follows

where is the number of atoms in the system and is the Tang and Toennies (TT) damping factor. The damping function is defined as follows

and its role is to attenuate the correction at short internuclear distances. A key component of the dDsC method is the damping factor :

where the fitted parameter controls the short-range behaviour and is the damping argument for the TT-damping factor associated with two separated atoms (). The term is computed according to the combination rule:

with being estimated from effective atomic polarizabilities:

The effective atom-in-molecule polarizabilities ${\alpha }_{i}$ are computed from the tabulated free-atomic polarizabilities (available for the elements of the first six rows of the periodic table except of lanthanides) in the same way as in the method of Tkatchenko and Scheffler (see Sec.~\ref{sec:vdwTS}) but the Hirshfeld-dominant instead of the conventional Hirshfeld partitioning is used. The last element of the correction is the damping argument $x$ \

\begin{equation} x=\left( 2{{q}_{ij}}+\frac{|({{Z}_{i}}-N_{i}^{D})\cdot ({{Z}_{j}}-N_{j}^{D})|}{{{r}_{ij}}} \right)\frac{N_{i}^{D}+N_{j}^{D}}{N_{i}^{D}\cdot N_{j}^{D}} \label{eqn:dDsCx} \end{equation} where $Z_i$ and $N_i^D$ are the nuclear charge and Hirshfeld dominant population of atom $i$, respectively. The term $2q_{ij} = q_{ij} + q_{ji}$ is a covalent bond index based on the overlap of conventional Hirshfeld populations $q_{ij}=\int w_i({\mathbf{r}})w_j({\mathbf{r}})\rho({\mathbf{r}})d{\mathbf{r}}$, and the fractional term in the parentheses is a distance-dependent ionic bond index.

\noindent The DFT-dDsC calculation is invoked by setting {\tt IVDW}=4. The default values for damping function parameters are available for the functionals PBE ({\tt GGA=PE}) and revPBE ({\tt GGA=RP}). If other functional is used, the user must define these parameters via corresponding tags in INCAR (parameters for common DFT functionals can be found in Ref.~\cite{Steinmann:11b}) The following parameters can be optionally defined in {\tt INCAR}:\\ \begin{tabular}{rll} {\tt VDW\_RADIUS} &= 50.0 & cutoff radius ({\AA}) for pair interactions\\ {\tt VDW\_S6} &= 13.96 & scaling factor ${a}_{0}$\\ {\tt VDW\_SR} &= 1.32 & scaling factor ${b}_{0}$\\ \end{tabular} \hspace{5mm}

\noindent Performance of PBE-dDsC in description of the adsorption of hydrocarbons on Pt(111) has been examined in Ref.~\cite{Gautier:15} PCCP 17, 28921 (2015).\\

\noindent IMPORTANT NOTES: \begin{itemize} \item the dDsC method has been implemented into VASP by Stephan N. Steinmann \item this method requires the use of POTCAR files from the PAW dataset version 52 or later \item the input reference polarizabilities for non-interacting atoms are available only for elements of the first six rows of periodic table except of lanthanides \item it is essential that a sufficiently dense FFT grid (controlled via {\tt NGFX(Y,Z)}) is used in the DFT-dDsC, especially for accurate gradients - we strongly recommend to use {\tt PREC=Accurate} for this type of calculations (in any case, avoid using {\tt PREC=Low}). \item the charge-density dependence of gradients is neglected. This approximation has been thoroughly investigated and validated.\cite{Bremond:14} \end{itemize}

Related Tags and Sections

IVDW, IALGO, DFT-D2, DFT-D3, Tkatchenko-Scheffler method

References

  1. a b S. N. Steinmann, and C. Corminboeuf, J. Chem. Phys. 134, 044117 (2011).
  2. S. N. Steinmann, and C. Corminboeuf, J. Chem. Theory Comput. 7, 3567 (2011).
  3. http://aip.scitation.org/doi/full/10.1063/1.2795701 A. D. Becke, and E. R. Johnson, ``Exchange-hole dipole moment and the dispersion interaction, J. Chem. Phys. 122, 154104 (2005). ]

Cite error: <ref> tag with name "kerber" defined in <references> is not used in prior text.


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